Source code for ignite.metrics.mean_pairwise_distance
from typing import Callable, Optional, Sequence, Union
import torch
from torch.nn.functional import pairwise_distance
from ignite.exceptions import NotComputableError
from ignite.metrics.metric import Metric, reinit__is_reduced, sync_all_reduce
__all__ = ["MeanPairwiseDistance"]
[docs]class MeanPairwiseDistance(Metric):
"""
Calculates the mean pairwise distance: average of pairwise distances computed on provided batches.
- ``update`` must receive output of the form ``(y_pred, y)`` or ``{'y_pred': y_pred, 'y': y}``.
"""
def __init__(
self,
p: int = 2,
eps: float = 1e-6,
output_transform: Callable = lambda x: x,
device: Optional[Union[str, torch.device]] = None,
):
super(MeanPairwiseDistance, self).__init__(output_transform, device=device)
self._p = p
self._eps = eps
@reinit__is_reduced
def reset(self):
self._sum_of_distances = 0.0
self._num_examples = 0
@reinit__is_reduced
def update(self, output: Sequence[torch.Tensor]) -> None:
y_pred, y = output
distances = pairwise_distance(y_pred, y, p=self._p, eps=self._eps)
self._sum_of_distances += torch.sum(distances).item()
self._num_examples += y.shape[0]
@sync_all_reduce("_sum_of_distances", "_num_examples")
def compute(self) -> Union[float, torch.Tensor]:
if self._num_examples == 0:
raise NotComputableError("MeanAbsoluteError must have at least one example before it can be computed.")
return self._sum_of_distances / self._num_examples